Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-513a-3p in CA Breast Richardson Cluster 45 Table contains all genes in the CA Breast Richardson cluster number 45. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-513a-3p 10776 ARPP19 cAMP-regulated phosphoprotein, 19kDa [Source:HGNC Symbol;Acc:16967] zzz999 11201 POLI polymerase (DNA directed) iota [Source:HGNC Symbol;Acc:9182] T 9716 AQR aquarius homolog (mouse) [Source:HGNC Symbol;Acc:29513] zzz999 84698 CAPS2 calcyphosine 2 [Source:HGNC Symbol;Acc:16471] zzz999 56985 C17orf48 chromosome 17 open reading frame 48 [Source:HGNC Symbol;Acc:30925] zzz999 85013 TMEM128 transmembrane protein 128 [Source:HGNC Symbol;Acc:28201] zzz999 8774 NAPG N-ethylmaleimide-sensitive factor attachment protein, gamma [Source:HGNC Symbol;Acc:7642] zzz999 55122 AKIRIN2 akirin 2 [Source:HGNC Symbol;Acc:21407] P T 6671 SP4 Sp4 transcription factor [Source:HGNC Symbol;Acc:11209] T 84190 C12orf26 chromosome 12 open reading frame 26 [Source:HGNC Symbol;Acc:26228] zzz999 64864 RFX7 regulatory factor X, 7 [Source:HGNC Symbol;Acc:25777] T 84333 PCGF5 polycomb group ring finger 5 [Source:HGNC Symbol;Acc:28264] T 64395 GMCL1 germ cell-less homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:23843] zzz999 9512 PMPCB peptidase (mitochondrial processing) beta [Source:HGNC Symbol;Acc:9119] T 9044 BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa (Mot1 homolog, S. cerevisiae) [Source:HGNC Symbol;Acc:17307] T 25909 AHCTF1 AT hook containing transcription factor 1 [Source:HGNC Symbol;Acc:24618] zzz999 5058 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 [Source:HGNC Symbol;Acc:8590] T 10209 EIF1 eukaryotic translation initiation factor 1 [Source:HGNC Symbol;Acc:3249] zzz999 130162 C2orf63 chromosome 2 open reading frame 63 [Source:HGNC Symbol;Acc:26453] zzz999 23161 SNX13 sorting nexin 13 [Source:HGNC Symbol;Acc:21335] P T 55133 SRBD1 S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:25521] zzz999 27292 DIMT1L DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:30217] T 117608 ZNF354B zinc finger protein 354B [Source:HGNC Symbol;Acc:17197] zzz999 80745 THUMPD2 THUMP domain containing 2 [Source:HGNC Symbol;Acc:14890] zzz999 51228 GLTP glycolipid transfer protein [Source:HGNC Symbol;Acc:24867] zzz999 23172 FAM175B family with sequence similarity 175, member B [Source:HGNC Symbol;Acc:28975] P T 23091 ZC3H13 zinc finger CCCH-type containing 13 [Source:HGNC Symbol;Acc:20368] T 51123 ZNF706 zinc finger protein 706 [Source:HGNC Symbol;Acc:24992] zzz999 120534 C11orf46 chromosome 11 open reading frame 46 [Source:HGNC Symbol;Acc:26798] T 23216 TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:HGNC Symbol;Acc:11578] zzz999 51526 C20orf111 chromosome 20 open reading frame 111 [Source:HGNC Symbol;Acc:16105] zzz999 51496 CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 [Source:HGNC Symbol;Acc:26936] P T 84708 LNX1 ligand of numb-protein X 1 [Source:HGNC Symbol;Acc:6657] T 57722 IGDCC4 immunoglobulin superfamily, DCC subclass, member 4 [Source:HGNC Symbol;Acc:13770] zzz999 257 ALX3 ALX homeobox 3 [Source:HGNC Symbol;Acc:449] zzz999 113612 CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1 [Source:HGNC Symbol;Acc:20582] T 55634 ZNF673 zinc finger family member 673 [Source:HGNC Symbol;Acc:26007] T 51185 CRBN cereblon [Source:HGNC Symbol;Acc:30185] zzz999 8683 SRSF9 serine/arginine-rich splicing factor 9 [Source:HGNC Symbol;Acc:10791] P T 57209 ZNF248 zinc finger protein 248 [Source:HGNC Symbol;Acc:13041] T 26122 EPC2 enhancer of polycomb homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:24543] T 57547 ZNF624 zinc finger protein 624 [Source:HGNC Symbol;Acc:29254] T 54839 LRRC49 leucine rich repeat containing 49 [Source:HGNC Symbol;Acc:25965] zzz999 57337 SENP7 SUMO1/sentrin specific peptidase 7 [Source:HGNC Symbol;Acc:30402] zzz999 51234 TMEM85 transmembrane protein 85 [Source:HGNC Symbol;Acc:28032] zzz999 55596 ZCCHC8 zinc finger, CCHC domain containing 8 [Source:HGNC Symbol;Acc:25265] zzz999 55781 RIOK2 RIO kinase 2 (yeast) [Source:HGNC Symbol;Acc:18999] zzz999 79694 MANEA mannosidase, endo-alpha [Source:HGNC Symbol;Acc:21072] T 1974 EIF4A2 eukaryotic translation initiation factor 4A2 [Source:HGNC Symbol;Acc:3284] P T 29761 USP25 ubiquitin specific peptidase 25 [Source:HGNC Symbol;Acc:12624] T 9666 DZIP3 DAZ interacting protein 3, zinc finger [Source:HGNC Symbol;Acc:30938] T 64432 MRPS25 mitochondrial ribosomal protein S25 [Source:HGNC Symbol;Acc:14511] zzz999 192670 EIF2C4 eukaryotic translation initiation factor 2C, 4 [Source:HGNC Symbol;Acc:18424] zzz999 23300 ATMIN ATM interactor [Source:HGNC Symbol;Acc:29034] P T 1911 PHC1 polyhomeotic homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3182] T 55425 KIAA1704 KIAA1704 [Source:HGNC Symbol;Acc:20298] zzz999 9988 DMTF1 cyclin D binding myb-like transcription factor 1 [Source:HGNC Symbol;Acc:14603] zzz999 64343 AZI2 5-azacytidine induced 2 [Source:HGNC Symbol;Acc:24002] T 9774 BCLAF1 BCL2-associated transcription factor 1 [Source:HGNC Symbol;Acc:16863] P T 84328 LZIC leucine zipper and CTNNBIP1 domain containing [Source:HGNC Symbol;Acc:17497] zzz999 5924 RASGRF2 Ras protein-specific guanine nucleotide-releasing factor 2 [Source:HGNC Symbol;Acc:9876] zzz999 157 ADRBK2 adrenergic, beta, receptor kinase 2 [Source:HGNC Symbol;Acc:290] T 84265 POLR3GL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like [Source:HGNC Symbol;Acc:28466] zzz999 26258 PLDN pallidin homolog (mouse) [Source:HGNC Symbol;Acc:8549] T 6314 ATXN7 ataxin 7 [Source:HGNC Symbol;Acc:10560] T 1389 CREBL2 cAMP responsive element binding protein-like 2 [Source:HGNC Symbol;Acc:2350] T 7574 ZNF26 Zinc finger protein 26 [Source:UniProtKB/Swiss-Prot;Acc:P17031] zzz999 1027 CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) [Source:HGNC Symbol;Acc:1785] zzz999 2145 EZH1 enhancer of zeste homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:3526] zzz999 10208 USPL1 ubiquitin specific peptidase like 1 [Source:HGNC Symbol;Acc:20294] zzz999 54893 MTMR10 myotubularin related protein 10 [Source:HGNC Symbol;Acc:25999] T 79738 BBS10 Bardet-Biedl syndrome 10 [Source:HGNC Symbol;Acc:26291] zzz999 84524 ZC3H8 zinc finger CCCH-type containing 8 [Source:HGNC Symbol;Acc:30941] zzz999 9318 COPS2 COP9 constitutive photomorphogenic homolog subunit 2 (Arabidopsis) [Source:HGNC Symbol;Acc:30747] T 7155 TOP2B topoisomerase (DNA) II beta 180kDa [Source:HGNC Symbol;Acc:11990] P T 7543 ZFX zinc finger protein, X-linked [Source:HGNC Symbol;Acc:12869] T 283742 FAM98B family with sequence similarity 98, member B [Source:HGNC Symbol;Acc:26773] zzz999 10216 PRG4 proteoglycan 4 [Source:HGNC Symbol;Acc:9364] zzz999 7444 VRK2 vaccinia related kinase 2 [Source:HGNC Symbol;Acc:12719] zzz999 23033 DOPEY1 dopey family member 1 [Source:HGNC Symbol;Acc:21194] zzz999 54497 HEATR5B HEAT repeat containing 5B [Source:HGNC Symbol;Acc:29273] T 399979 SNX19 sorting nexin 19 [Source:HGNC Symbol;Acc:21532] zzz999 55623 THUMPD1 THUMP domain containing 1 [Source:HGNC Symbol;Acc:23807] T 1738 DLD dihydrolipoamide dehydrogenase [Source:HGNC Symbol;Acc:2898] T 9877 ZC3H11A zinc finger CCCH-type containing 11A [Source:HGNC Symbol;Acc:29093] zzz999 115209 OMA1 OMA1 homolog, zinc metallopeptidase (S. cerevisiae) [Source:HGNC Symbol;Acc:29661] T 54495 TMX3 thioredoxin-related transmembrane protein 3 [Source:HGNC Symbol;Acc:24718] T 84317 CCDC115 coiled-coil domain containing 115 [Source:HGNC Symbol;Acc:28178] zzz999 5193 PEX12 peroxisomal biogenesis factor 12 [Source:HGNC Symbol;Acc:8854] T 11193 WBP4 WW domain binding protein 4 (formin binding protein 21) [Source:HGNC Symbol;Acc:12739] P T 54431 DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:HGNC Symbol;Acc:24637] T 54980 C2orf42 chromosome 2 open reading frame 42 [Source:HGNC Symbol;Acc:26056] zzz999 10808 HSPH1 heat shock 105kDa/110kDa protein 1 [Source:HGNC Symbol;Acc:16969] P T 148423 C1orf52 chromosome 1 open reading frame 52 [Source:HGNC Symbol;Acc:24871] zzz999 22841 RAB11FIP2 RAB11 family interacting protein 2 (class I) [Source:HGNC Symbol;Acc:29152] T 10526 IPO8 importin 8 [Source:HGNC Symbol;Acc:9853] T 55599 RNPC3 RNA-binding region (RNP1, RRM) containing 3 [Source:HGNC Symbol;Acc:18666] zzz999 64969 MRPS5 mitochondrial ribosomal protein S5 [Source:HGNC Symbol;Acc:14498] zzz999 5578 PRKCA protein kinase C, alpha [Source:HGNC Symbol;Acc:9393] T 245812 CNPY4 canopy 4 homolog (zebrafish) [Source:HGNC Symbol;Acc:28631] zzz999 65056 GPBP1 GC-rich promoter binding protein 1 [Source:HGNC Symbol;Acc:29520] zzz999 83452 RAB33B RAB33B, member RAS oncogene family [Source:HGNC Symbol;Acc:16075] T 50862 RNF141 ring finger protein 141 [Source:HGNC Symbol;Acc:21159] T 136895 C7orf31 chromosome 7 open reading frame 31 [Source:HGNC Symbol;Acc:21722] T 154743 C7orf60 chromosome 7 open reading frame 60 [Source:HGNC Symbol;Acc:26475] P T 81790 RNF170 ring finger protein 170 [Source:HGNC Symbol;Acc:25358] zzz999 663 BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 [Source:HGNC Symbol;Acc:1083] zzz999 196074 METTL15 methyltransferase like 15 [Source:HGNC Symbol;Acc:26606] T 146050 ZSCAN29 zinc finger and SCAN domain containing 29 [Source:HGNC Symbol;Acc:26673] zzz999 5289 PIK3C3 phosphoinositide-3-kinase, class 3 [Source:HGNC Symbol;Acc:8974] zzz999 8649 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 [Source:HGNC Symbol;Acc:15606] T 54916 C14orf101 chromosome 14 open reading frame 101 [Source:HGNC Symbol;Acc:20185] T 54822 TRPM7 transient receptor potential cation channel, subfamily M, member 7 [Source:HGNC Symbol;Acc:17994] T 9360 PPIG peptidylprolyl isomerase G (cyclophilin G) [Source:HGNC Symbol;Acc:14650] zzz999 10314 LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) [Source:HGNC Symbol;Acc:6508] zzz999 5082 PDCL phosducin-like [Source:HGNC Symbol;Acc:8770] zzz999 64376 IKZF5 IKAROS family zinc finger 5 (Pegasus) [Source:HGNC Symbol;Acc:14283] zzz999 81573 ANKRD13C ankyrin repeat domain 13C [Source:HGNC Symbol;Acc:25374] T 57149 LYRM1 LYR motif containing 1 [Source:HGNC Symbol;Acc:25074] T 5689 PSMB1 proteasome (prosome, macropain) subunit, beta type, 1 [Source:HGNC Symbol;Acc:9537] zzz999 79963 zzz999 zzz999 zzz999 22908 SACM1L SAC1 suppressor of actin mutations 1-like (yeast) [Source:HGNC Symbol;Acc:17059] zzz999 84945 ABHD13 abhydrolase domain containing 13 [Source:HGNC Symbol;Acc:20293] P T 51290 ERGIC2 ERGIC and golgi 2 [Source:HGNC Symbol;Acc:30208] zzz999 23411 SIRT1 sirtuin 1 [Source:HGNC Symbol;Acc:14929] zzz999 23592 LEMD3 LEM domain containing 3 [Source:HGNC Symbol;Acc:28887] T 29945 ANAPC4 anaphase promoting complex subunit 4 [Source:HGNC Symbol;Acc:19990] zzz999 373509 USP50 ubiquitin specific peptidase 50 [Source:HGNC Symbol;Acc:20079] zzz999 56605 ERO1LB ERO1-like beta (S. cerevisiae) [Source:HGNC Symbol;Acc:14355] T 10845 CLPX ClpX caseinolytic peptidase X homolog (E. coli) [Source:HGNC Symbol;Acc:2088] zzz999 7695 ZNF136 zinc finger protein 136 [Source:HGNC Symbol;Acc:12920] zzz999 137492 VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:24928] T 2531 KDSR 3-ketodihydrosphingosine reductase [Source:HGNC Symbol;Acc:4021] T 143884 CWF19L2 CWF19-like 2, cell cycle control (S. pombe) [Source:HGNC Symbol;Acc:26508] zzz999 119504 ANAPC16 anaphase promoting complex subunit 16 [Source:HGNC Symbol;Acc:26976] T 7559 ZNF12 zinc finger protein 12 [Source:HGNC Symbol;Acc:12902] T 7596 ZNF45 zinc finger protein 45 [Source:HGNC Symbol;Acc:13111] zzz999 4092 SMAD7 SMAD family member 7 [Source:HGNC Symbol;Acc:6773] P T 153241 CEP120 centrosomal protein 120kDa [Source:HGNC Symbol;Acc:26690] zzz999 2252 FGF7 fibroblast growth factor 7 [Source:HGNC Symbol;Acc:3685] T 1386 ATF2 activating transcription factor 2 [Source:HGNC Symbol;Acc:784] zzz999 1781 DYNC1I2 dynein, cytoplasmic 1, intermediate chain 2 [Source:HGNC Symbol;Acc:2964] T 5903 RANBP2 RAN binding protein 2 [Source:HGNC Symbol;Acc:9848] zzz999

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